QCAlign

QCAlign documentation

• What is QCAlign?
  • How does it work?
  • What can you do with the results?
  • More information on QUINT
• Installation and citation
  • Basic information
  • Conditions of use
  • Acknowledgements
  • How to cite QCAlign
  • How to cite the reference atlases
  • Contact us

Navigation

• Opening an image series
• Navigation
• Atlas overlay
• Grid overlay
  • Grid aesthetics
  • Selecting and adjusting the grid spacing
• Exploring the hierarchy
  • Creating a Customized Hierarchy
  • Saving the Hierarchy
  • Importing a Hierarchy
  • Exporting the Hierarchy

Quality control (QC)

• 1. QC Assessment of the Section Images
  • How to perform the assessment
• 2. QC Assessment of the Atlas-Registration
  • How to perform the assessment
  • Example 1: Section with visible landmarks
  • Example 2: Section with visible landmarks
  • Example 3: Section with ambiguous boundaries
• QCAlign Results
  • How to calculate % accuracy /inaccuracy / uncertainty?
  • How to calculate % damage?
  • How to use the results?